ITm Seed Dataset Leaderboard

Curated IS630/Tc1/mariner transposable element collections — Stage 1

# Team Score Div Ann Func Size Seqs Fam Top Commit

Quick start

The easiest way to submit is with the submit.py script:

pip install -r ci/requirements.txt
python submit.py                     # auto-detects entries/{your-username}/
python submit.py entries/my-team     # or specify explicitly
python submit.py --no-pr             # validate locally only

The script validates your entry locally (with a detailed score report), creates a PR, waits for CI, and reports pass/fail with feedback.

Manual submission

  1. Fork this repo.
  2. Create entries/{your-github-username}/ with three files: protein.sto, dna.sto, and provenance.tsv. Optional: PDB structure files.
  3. Open a pull request to main.
  4. CI validates your entry and reports pass/fail on the PR.
  5. If all changed files are inside entries/{your-github-username}/, the PR is automatically approved and merged.
  6. The leaderboard updates with your score after merge.

Your entry directory must match your GitHub username (lowercase). PRs that touch files outside your own entry require manual review. To update, open a new PR. To withdraw, delete your entry directory via PR.

See the format spec and scoring policy for details.